Hi there,
I would like to run a gPPI on images that are already fully pre-processed, from steps performed outside of CONN-toolbox. In other words, I have .nii files that I don't need to run through CONN's pre-pro and denoising steps.
It appears that the CONN GUI does not let you skip pre-pro/denoising steps prior to first-level analysis and requires you to click through all steps from beginning to end.
Is there a way to circumvent this and skip straight to performing first & second level gPPI?
Can this be done via GUI or is there a way to navigate this via scripts?
The same question is likely also relevant for other analyses in CONN-toolbox beyond gPPI
Any information is appreciated,
Best,
Patrick
I would like to run a gPPI on images that are already fully pre-processed, from steps performed outside of CONN-toolbox. In other words, I have .nii files that I don't need to run through CONN's pre-pro and denoising steps.
It appears that the CONN GUI does not let you skip pre-pro/denoising steps prior to first-level analysis and requires you to click through all steps from beginning to end.
Is there a way to circumvent this and skip straight to performing first & second level gPPI?
Can this be done via GUI or is there a way to navigate this via scripts?
The same question is likely also relevant for other analyses in CONN-toolbox beyond gPPI
Any information is appreciated,
Best,
Patrick