Once again I am confused. You are talking about smoothed and smoothed data. If I wanted to do all the preprocess outside of Conn (normalization, slice timing correction, distortion correction, etc) what would I need to enter into CONN for the Setup. My current understanding is that I would need to enter in the normalized fMRI data, the structural image, and the tissue masks (gm, wm, and csf). I would also need to include the motion parameters and the scrubbing matrix.
Is there anything I am missing?
Bob
Is there anything I am missing?
Bob
