Dear Alfonso,
I am trying to use CONN 18b with SPM8 to preprocess data for 3 subjects (1 session). However, I keep getting an error. I am using the default preprocessing pipeline for volume-based analyses (direct normalization to MNI-space). Below is the error displayed in Matlab:
[quote](3).spm.temporal.st.refslice = 0.976744186046511
Item 'Reference Slice', field 'val': Item must be an array of natural numbers.
Item 'Reference Slice', field 'val': Item must be an array of natural numbers.
Item 'Reference Slice', field 'val': Item must be an array of natural numbers.
------------------------------------------------------------------------
Running job #1
------------------------------------------------------------------------
No executable modules, but still unresolved dependencies or incomplete module inputs.
The following modules did not run:
Skipped: Slice Timing
Skipped: Slice Timing
Skipped: Slice Timing
ERROR DESCRIPTION:
Error using cfg_util (line 835)
Job execution failed. The full log of this run can be found in MATLAB command window, starting with the lines (look for the line showing the exact #job as displayed in this error message)
------------------
Running job #1
------------------
Error in spm_jobman (line 217)
Error in conn_setup_preproc (line 2566)
Error in conn (line 1081)
Error in conn_menumanager (line 120)
CONN18.b
SPM8 + Beamforming DEM FieldMap MEEGtools
Matlab v.2018b
project: CONN18.b
storage: 4962.2Gb available
spm @ /usr/local/spm8
conn @ /usr/local/conn
[/quote]
Another post suggested that checking 'First functional volume as reference' may solve this issue, but unfortunately I get the same error.
I was able to successfully preprocess this data with SPM12 (same input files, same pipeline, no errors). So for some reason, this is only happening with SPM8.
I am only needing to use SPM8 to replicate some previous results, and the data associated with these results was preprocessed and analyzed using CONN/SPM8. Is this an issue that would be solved by finding an older version of CONN to run with SMP8? Any advice is appreciated. Thank you in advance for your time!
Best,
Dalia
I am trying to use CONN 18b with SPM8 to preprocess data for 3 subjects (1 session). However, I keep getting an error. I am using the default preprocessing pipeline for volume-based analyses (direct normalization to MNI-space). Below is the error displayed in Matlab:
[quote](3).spm.temporal.st.refslice = 0.976744186046511
Item 'Reference Slice', field 'val': Item must be an array of natural numbers.
Item 'Reference Slice', field 'val': Item must be an array of natural numbers.
Item 'Reference Slice', field 'val': Item must be an array of natural numbers.
------------------------------------------------------------------------
Running job #1
------------------------------------------------------------------------
No executable modules, but still unresolved dependencies or incomplete module inputs.
The following modules did not run:
Skipped: Slice Timing
Skipped: Slice Timing
Skipped: Slice Timing
ERROR DESCRIPTION:
Error using cfg_util (line 835)
Job execution failed. The full log of this run can be found in MATLAB command window, starting with the lines (look for the line showing the exact #job as displayed in this error message)
------------------
Running job #1
------------------
Error in spm_jobman (line 217)
Error in conn_setup_preproc (line 2566)
Error in conn (line 1081)
Error in conn_menumanager (line 120)
CONN18.b
SPM8 + Beamforming DEM FieldMap MEEGtools
Matlab v.2018b
project: CONN18.b
storage: 4962.2Gb available
spm @ /usr/local/spm8
conn @ /usr/local/conn
[/quote]
Another post suggested that checking 'First functional volume as reference' may solve this issue, but unfortunately I get the same error.
I was able to successfully preprocess this data with SPM12 (same input files, same pipeline, no errors). So for some reason, this is only happening with SPM8.
I am only needing to use SPM8 to replicate some previous results, and the data associated with these results was preprocessed and analyzed using CONN/SPM8. Is this an issue that would be solved by finding an older version of CONN to run with SMP8? Any advice is appreciated. Thank you in advance for your time!
Best,
Dalia