RE: Accidentally overwrote 2nd level QC covariates!

[color=#000000]Thank you very much Alfonso![/color]

[color=#000000]Everything worked except for denoising again did not populate the other field (QC_BOLDstd) and i don't have GC-GCOR in the list at all.[/color]



[i]Originally posted by Alfonso Nieto-Castanon:[/i][quote][color=#000000]Hi Sarah,[/color]

[color=#000000]The [b]QC_validscans[/b], [b]QC_invalidscans[/b], [b]QC_MaxMotion[/b], [b]QC_MeanMotion[/b], [b]QC_MaxGSchange[/b], and [b]QC_MeanGSchange[/b] variables may be re-created simply by re-computing the 'scrubbing' covariate (see [i]compute new/derived first-level covariates [/i]menu in the[i] Setup.Covariates (1st-level)[/i] tab, or "doc [i]conn_convertl12l1covariate[/i]")[/color]

[color=#000000]The [b]QC_GrayMatter_vol[/b], [b]QC_GrayMatter_eroded_vol[/b], [b]QC_WhiteMatter_vol[/b], [b]QC_WhiteMatter_eroded_vol[/b], [b]QC_CSF_vol[/b], and [b]QC_CSF_eroded_vol[/b] variables may be re-created by re-computing the erosion step (see [i]erosion settings [/i]menu in the [i]Setup.ROIs [/i]tab, or see "doc [i]conn_maskerode"[/i])[/color]

[color=#000000]In order to re-create the [b]GC_GCOR[/b] and [b]GC_BOLDstd[/b] variables you would need to re-run the standard [i]Denoising[/i] step. [/color]

[color=#000000]Hope this helps[/color]
[color=#000000]Alfonso[/color]
[i]Originally posted by Sarah Kark:[/i][quote]Hello,

I created a .m script in an effort to stream-line entry of of 2nd level covariates into CONN_x. However, I accidentally saved an erroneous version where I overwrote the QC_ variables listed in the 2nd level covariates. 

Is there a way to get these values back into 2nd level covariates without having to re-run all of preprocessing?

Thank you!
Sarah[/quote][/quote]