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SPM12 prepro batch implementation

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Dear Alfonso,

We are trying to apply identical preprocessing pipeline of SPM12 (located at "...SPM12\batches\prepro_fmri.m") via CONN.
However, at the coregistration stage, CONN doesn't allow us to select skull stripped structural image instead of original.
Do you have any advise for us?
Thank you so much for your help.

Kind Regards
Ali Bayram

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