[color=#000000]Hi Eugenio,[/color]
[color=#000000]I am curious about this, it seems like perhaps some issue with file permissions? (e.g. if CONN is not able to delete .dmat files generated by the SGE scheduler in your projects' directory). I know you already posted that this was solved, but I was wondering if you can tell me more details about why this was failing (just to see if I can try to avoid other users from running into a similar scenario in the the future)[/color]
[color=#000000]Thanks![/color]
[color=#000000]Alfonso[/color]
[i]Originally posted by Eugenio Abela:[/i][quote]Hi all
I've performed the Setup step using a SGE computing environment to separate into several jobs (n=20, total of 180 subjects). This runs smoothly, jobs are (apparently) merged, and I can move on to the Denoising step. However, once I want to start Denoising, Conn tells me there are still pending jobs, and starts merging again. This then takes ages, and Conn then saves, but jobs remain pending. I'm at loss as to why this happens. Has anyone run into similar issues?
Thanks for any pointers!
Eugenio[/quote]
[color=#000000]I am curious about this, it seems like perhaps some issue with file permissions? (e.g. if CONN is not able to delete .dmat files generated by the SGE scheduler in your projects' directory). I know you already posted that this was solved, but I was wondering if you can tell me more details about why this was failing (just to see if I can try to avoid other users from running into a similar scenario in the the future)[/color]
[color=#000000]Thanks![/color]
[color=#000000]Alfonso[/color]
[i]Originally posted by Eugenio Abela:[/i][quote]Hi all
I've performed the Setup step using a SGE computing environment to separate into several jobs (n=20, total of 180 subjects). This runs smoothly, jobs are (apparently) merged, and I can move on to the Denoising step. However, once I want to start Denoising, Conn tells me there are still pending jobs, and starts merging again. This then takes ages, and Conn then saves, but jobs remain pending. I'm at loss as to why this happens. Has anyone run into similar issues?
Thanks for any pointers!
Eugenio[/quote]