Dear Conners,
I stopped functional and structural images preprocessing because I forgot to add one pre-processing step. I would like to use the same .mat file that in the previous analysis in order to avoid having to select each structural and functional image again and only include that new step. I have tried to rerun the analysis organizing the original structural and functional images in the same way that in the previous analysis (same path directory) and using the previous .mat file. As might be expected, the conn toolbox looked for preprocessing outputs that are not in that directory. When I cancel that search and I click on "structural" or "functional" options in the gui the error messages included below appear. How could I re-use the .mat file to avoid having to select the images again?
I ERROR DESCRIPTION for structural images:
Error using spm_sample_vol
Cant open image file.
Error in conn_menu>conn_spm_read_vols (line 723)
x=double(spm_sample_vol(v,xyz(1,:),xyz(2,:),xyz(3,:),1));
Error in conn_menu (line 516)
[temp,volhdr]=conn_spm_read_vols(title);
Error in conn (line 1520)
conn_menu('updateimage',CONN_h.menus.m_setup_00{5},vol);
Error in conn (line 2784)
conn gui_setup;
Error in conn_menumanager (line 119)
feval(CONN_MM.MENU{n0}.callback{n1}{1},CONN_MM.MENU{n0}.callback{n1}{2:end});
CONN v.15.h
SPM8 + Beamforming DEM FieldMap LST MEEGtools aal wfupickatlas
Matlab v.2014a
storage: 472.3Gb available
Warning: Contents.m overloaded by version in folder C:\Program Files\MATLAB\R2014a\toolbox\matlab\demos
Warning: spm_getSPM.m overloaded by version in folder C:\Program Files\MATLAB\R2014a\toolbox\spm8\toolbox\wfu_pickatlas
SUGGESTIONS:
Potential missing data files or incomplete analyses. Try loading your project again (this will check for potential missing files) or re-running some of the analysis steps if some may have not completed correctly
ERROR DESCRIPTION for functional images:
Error using spm_sample_vol
Cant open image file.
Error in conn_menu>conn_spm_read_vols (line 723)
x=double(spm_sample_vol(v,xyz(1,:),xyz(2,:),xyz(3,:),1));
Error in conn_menu (line 511)
[temp1,volhdr1]=conn_spm_read_vols(title(1));
Error in conn (line 1270)
conn_menu('updateimage',CONN_h.menus.m_setup_00{5},CONN_x.Setup.functional{nsub}{nses}{3});
Error in conn_menumanager (line 119)
feval(CONN_MM.MENU{n0}.callback{n1}{1},CONN_MM.MENU{n0}.callback{n1}{2:end});
CONN v.15.h
SPM8 + Beamforming DEM FieldMap LST MEEGtools aal wfupickatlas
Matlab v.2014a
storage: 472.3Gb available
Warning: Contents.m overloaded by version in folder C:\Program Files\MATLAB\R2014a\toolbox\matlab\demos
Warning: spm_getSPM.m overloaded by version in folder C:\Program Files\MATLAB\R2014a\toolbox\spm8\toolbox\wfu_pickatlas
SUGGESTIONS:
Potential missing data files or incomplete analyses. Try loading your project again (this will check for potential missing files) or re-running some of the analysis steps if some may have not completed correctly
Thank you in advance,
Oiane
I stopped functional and structural images preprocessing because I forgot to add one pre-processing step. I would like to use the same .mat file that in the previous analysis in order to avoid having to select each structural and functional image again and only include that new step. I have tried to rerun the analysis organizing the original structural and functional images in the same way that in the previous analysis (same path directory) and using the previous .mat file. As might be expected, the conn toolbox looked for preprocessing outputs that are not in that directory. When I cancel that search and I click on "structural" or "functional" options in the gui the error messages included below appear. How could I re-use the .mat file to avoid having to select the images again?
I ERROR DESCRIPTION for structural images:
Error using spm_sample_vol
Cant open image file.
Error in conn_menu>conn_spm_read_vols (line 723)
x=double(spm_sample_vol(v,xyz(1,:),xyz(2,:),xyz(3,:),1));
Error in conn_menu (line 516)
[temp,volhdr]=conn_spm_read_vols(title);
Error in conn (line 1520)
conn_menu('updateimage',CONN_h.menus.m_setup_00{5},vol);
Error in conn (line 2784)
conn gui_setup;
Error in conn_menumanager (line 119)
feval(CONN_MM.MENU{n0}.callback{n1}{1},CONN_MM.MENU{n0}.callback{n1}{2:end});
CONN v.15.h
SPM8 + Beamforming DEM FieldMap LST MEEGtools aal wfupickatlas
Matlab v.2014a
storage: 472.3Gb available
Warning: Contents.m overloaded by version in folder C:\Program Files\MATLAB\R2014a\toolbox\matlab\demos
Warning: spm_getSPM.m overloaded by version in folder C:\Program Files\MATLAB\R2014a\toolbox\spm8\toolbox\wfu_pickatlas
SUGGESTIONS:
Potential missing data files or incomplete analyses. Try loading your project again (this will check for potential missing files) or re-running some of the analysis steps if some may have not completed correctly
ERROR DESCRIPTION for functional images:
Error using spm_sample_vol
Cant open image file.
Error in conn_menu>conn_spm_read_vols (line 723)
x=double(spm_sample_vol(v,xyz(1,:),xyz(2,:),xyz(3,:),1));
Error in conn_menu (line 511)
[temp1,volhdr1]=conn_spm_read_vols(title(1));
Error in conn (line 1270)
conn_menu('updateimage',CONN_h.menus.m_setup_00{5},CONN_x.Setup.functional{nsub}{nses}{3});
Error in conn_menumanager (line 119)
feval(CONN_MM.MENU{n0}.callback{n1}{1},CONN_MM.MENU{n0}.callback{n1}{2:end});
CONN v.15.h
SPM8 + Beamforming DEM FieldMap LST MEEGtools aal wfupickatlas
Matlab v.2014a
storage: 472.3Gb available
Warning: Contents.m overloaded by version in folder C:\Program Files\MATLAB\R2014a\toolbox\matlab\demos
Warning: spm_getSPM.m overloaded by version in folder C:\Program Files\MATLAB\R2014a\toolbox\spm8\toolbox\wfu_pickatlas
SUGGESTIONS:
Potential missing data files or incomplete analyses. Try loading your project again (this will check for potential missing files) or re-running some of the analysis steps if some may have not completed correctly
Thank you in advance,
Oiane